drug_interactions¶
from relational_datasets import load
train, test = load("drug_interactions", "v0.0.6")
using RelationalDatasets
train, test = load("drug_interactions", "v0.0.6")
Drug-Drug Interactions (DDIs) occur when two drugs interact.
Task¶
Link Prediction. interacts(+drug,+drug): Do two drugs interact or not?
enzyme(-enzyme,+drug).
target(-target,+drug).
transporter(-transporter,+drug).
enzymesubstrate(+drug,-enzyme).
enzymeinhibitor(+drug,-enzyme).
enzymeinducer(+drug,-enzyme).
targetsubstrate(+drug,-target).
targetantagonist(+drug,-target).
targetinducer(+drug,-target).
targetinhibitor(+drug,-target).
targetagonist(+drug,-target).
transportersubstrate(+drug,-transporter).
transporterinhibitor(+drug,-transporter).
transporterinducer(+drug,-transporter).
interacts(+drug,+drug).
Publications¶
- Devendra Singh Dhami, Siwen Yan, Gautam Kunapuli, Sriraam Natarajan, "Non-Parametric Learning of Embeddings for Relational Data using Gaifman Locality Theorem." International Conference on Inductive Logic Programming (ILP) 2021
- Devendra Singh Dhami, Siwen Yan, Gautam Kunapuli, David Page, Sriraam Natarajan, "Predicting Drug-Drug Interactions from Heterogeneous Data: An Embedding Approach." 19th International Conference in Artificial Intelligence in Medicine (AIME) 2021.
- Devendra Singh Dhami, Siwen Yan, Gautam Kunapuli, Sriraam Natarajan, "Non-Parametric Learning of Gaifman Models." Workshop on Statistical Relational AI (StarAI) 2020
- Devendra Singh Dhami, Gautam Kunapuli, Sriraam Natarajan, "Efficient Learning of Relational Gaifman Models using Probabilistic Logic." Workshop on Probabilistic Logic Programming (PLP) 2019
Last update:
November 9, 2022